Create scatter plot of OAR score vs percent missing

Create scatter plot of OAR score vs percent missing

Usage

scatter_score_missing(
  data,
  group.by = "seurat_clusters",
  seurat_v5 = TRUE,
  suffix = "",
  pt.size = 0.5
)

Arguments

data

a seurat v5 object that has OAR score in meta data, or a data.frame with the OAR score results.

group.by

a meta data category to color data by. Default is seurat_clusters.

seurat_v5

a boolean to indicate if supplied data is a Seurat object, default is TRUE

suffix

a string that was previously appended to the output variables. Default is empty.

pt.size

a numerical value for the size of points to be passed to the size argument in geom_point. Default is 0.5.

Value

Scatter plot of OAR score vs percent missing, colored by grouping of choice.

Examples

if (FALSE) { # \dontrun{
##Starting from a Seurat object
output <- scatter_score_missing(pmbcs_oar)

##Starting from a oar results data.frame
output <- scatter_score_missing(oar, seurat_v5 = F)
} # }