Prepare data for oar fold functions
Usage
oar_preprocess_data(data, tr = 1, seurat_v5 = TRUE, blacklisted.genes = NULL)
Arguments
- data
a seurat object or gene expression matrix
- tr
a filtering threshold. Default is 1.
- seurat_v5
a boolean to indicate if supplied data is a Seurat object, default is TRUE
- blacklisted.genes
a character vector with gene names to be excluded from the analysis. Default is empty.
Value
Data matrix with blacklisted genes removed
Examples
if (FALSE) { # \dontrun{
data <- oar_preprocess_data(data)
} # }
